STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000016591annotation not available (581 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.983
ENSCAPP00000016185
annotation not available
   
 0.976
ITGB5
Integrin subunit beta 5.
   
 0.969
ITGB6
Integrin subunit beta 6.
   
 0.964
ITGB4
Integrin subunit beta 4.
   
 0.964
ITGB8
Integrin subunit beta 8.
    
 0.960
ITGB7
Integrin subunit beta 7.
   
 0.955
ENSCAPP00000016172
annotation not available
    
 0.947
COL1A2
Collagen type I alpha 2 chain.
    
 0.941
ITGA3
Integrin subunit alpha 3.
   
 
0.939
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.