STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP4Thyroid hormone receptor interactor 4. (404 aa)    
Predicted Functional Partners:
ENSCAPP00000010752
annotation not available
    
 0.997
ASCC3
Activating signal cointegrator 1 complex subunit 3.
    
 0.996
HFM1
Helicase for meiosis 1.
    
 0.972
ENSCAPP00000001157
annotation not available
    
   0.935
RCOR1
REST corepressor 1.
    
   0.935
MED1
Mediator complex subunit 1.
    
   0.935
ENSCAPP00000004818
annotation not available
    
   0.935
MED25
Mediator complex subunit 25.
    
   0.935
MED23
Mediator complex subunit 23.
    
   0.935
MED10
Mediator complex subunit 10.
    
   0.935
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.