Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ga0061063_0330 | Ga0061063_0332 | GCA_001418035_00130 | GCA_001418035_00132 | Unannotated protein. | Unannotated protein. | 0.485 |
Ga0061063_0330 | queC | GCA_001418035_00130 | GCA_001418035_00131 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.485 |
Ga0061063_0330 | queE | GCA_001418035_00130 | GCA_001418035_00133 | Unannotated protein. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.529 |
Ga0061063_0332 | Ga0061063_0330 | GCA_001418035_00132 | GCA_001418035_00130 | Unannotated protein. | Unannotated protein. | 0.485 |
Ga0061063_0332 | guaA | GCA_001418035_00132 | GCA_001418035_00118 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.510 |
Ga0061063_0332 | queC | GCA_001418035_00132 | GCA_001418035_00131 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.990 |
Ga0061063_0332 | queE | GCA_001418035_00132 | GCA_001418035_00133 | Unannotated protein. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.999 |
Ga0061063_0332 | queF | GCA_001418035_00132 | GCA_001418035_00271 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.868 |
Ga0061063_0634 | Ga0061063_0635 | GCA_001418035_00432 | GCA_001418035_00433 | Unannotated protein. | Unannotated protein. | 0.931 |
Ga0061063_0634 | queE | GCA_001418035_00432 | GCA_001418035_00133 | Unannotated protein. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.826 |
Ga0061063_0635 | Ga0061063_0634 | GCA_001418035_00433 | GCA_001418035_00432 | Unannotated protein. | Unannotated protein. | 0.931 |
Ga0061063_0635 | Ga0061063_1453 | GCA_001418035_00433 | GCA_001418035_01244 | Unannotated protein. | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.409 |
Ga0061063_0635 | queE | GCA_001418035_00433 | GCA_001418035_00133 | Unannotated protein. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.769 |
Ga0061063_1453 | Ga0061063_0635 | GCA_001418035_01244 | GCA_001418035_00433 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein. | 0.409 |
Ga0061063_1453 | guaA | GCA_001418035_01244 | GCA_001418035_00118 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.614 |
Ga0061063_1453 | queE | GCA_001418035_01244 | GCA_001418035_00133 | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.893 |
glmS | guaA | GCA_001418035_00556 | GCA_001418035_00118 | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.529 |
glmS | purF | GCA_001418035_00556 | GCA_001418035_01181 | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.926 |
glmS | queC | GCA_001418035_00556 | GCA_001418035_00131 | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Unannotated protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.463 |
glmS | queE | GCA_001418035_00556 | GCA_001418035_00133 | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.512 |
page 1 of 3