STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_0444Unannotated protein. (689 aa)    
Predicted Functional Partners:
macB
Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.914
Ga0061063_0445
Unannotated protein.
  
 0.909
Ga0061063_0442
Unannotated protein.
       0.741
Ga0061063_0443
Unannotated protein.
     
 0.732
Ga0061063_0712
Unannotated protein.
  
 0.584
Ga0061063_1513
Unannotated protein.
  
 0.584
Ga0061063_1678
Unannotated protein.
  
 0.584
Ga0061063_2160
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.584
Ga0061063_0441
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
       0.496
Ga0061063_0475
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.486
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.