STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_0459Unannotated protein. (216 aa)    
Predicted Functional Partners:
Ga0061063_0458
Unannotated protein.
 
 
 0.957
macB
Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
0.948
Ga0061063_0428
Unannotated protein.
 
 0.944
Ga0061063_1242
Unannotated protein.
 
 0.934
Ga0061063_0572
Unannotated protein.
 
 
 
  0.918
lolA
Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.884
Ga0061063_0460
Unannotated protein.
 
     0.865
pstB
Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
0.831
Ga0061063_0457
Unannotated protein.
       0.699
Ga0061063_2158
Unannotated protein.
    
 0.651
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.