STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_0863Unannotated protein. (483 aa)    
Predicted Functional Partners:
Ga0061063_2261
Unannotated protein.
 
 
   0.688
ribB-2
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.623
Ga0061063_0742
Unannotated protein.
    
 0.556
Ga0061063_1288
Unannotated protein.
    
 0.547
Ga0061063_2270
Unannotated protein.
    
 0.546
Ga0061063_0614
Unannotated protein.
 
  
 0.529
Ga0061063_0864
Unannotated protein.
  
    0.526
Ga0061063_0865
Unannotated protein.
       0.526
Ga0061063_0866
Unannotated protein.
       0.526
Ga0061063_0867
Unannotated protein.
       0.526
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.