STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_1216Unannotated protein. (609 aa)    
Predicted Functional Partners:
Ga0061063_1215
Unannotated protein.
 
  
 0.989
Ga0061063_1212
Unannotated protein; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.977
Ga0061063_1211
Unannotated protein.
 
  
 0.972
Ga0061063_1213
Unannotated protein.
 
  
 0.865
Ga0061063_1217
Unannotated protein.
 
  
 0.806
Ga0061063_1224
Unannotated protein.
 
  
 0.802
Ga0061063_1214
Unannotated protein.
       0.762
Ga0061063_1220
Unannotated protein.
 
    0.747
Ga0061063_1219
Unannotated protein.
 
  
 0.674
Ga0061063_1221
Unannotated protein.
 
    0.542
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.