STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_1716Unannotated protein. (120 aa)    
Predicted Functional Partners:
Ga0061063_1718
Unannotated protein.
 
 
 0.998
Ga0061063_1719
Unannotated protein.
 
 
 0.998
Ga0061063_1717
Unannotated protein.
 
    0.941
Ga0061063_1721
Unannotated protein.
 
     0.769
Ga0061063_1720
Unannotated protein.
       0.708
Ga0061063_1715
Unannotated protein.
       0.535
Ga0061063_0904
Unannotated protein.
  
     0.520
Ga0061063_1722
Unannotated protein.
       0.427
Ga0061063_1723
Unannotated protein.
       0.427
ung
Unannotated protein; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
      
 0.410
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.