STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttcAUnannotated protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. (328 aa)    
Predicted Functional Partners:
Ga0061063_0564
Unannotated protein.
    
  0.906
Ga0061063_0486
Unannotated protein.
  
 
 0.875
speE-2
Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
       0.811
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.773
Ga0061063_1989
Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.609
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
   
 0.599
Ga0061063_2740
Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.582
Ga0061063_2350
Unannotated protein.
  
 
 0.575
Ga0061063_1680
Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.569
Ga0061063_1986
Unannotated protein.
       0.552
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.