STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ga0061063_2616Unannotated protein. (396 aa)    
Predicted Functional Partners:
Ga0061063_2617
Unannotated protein.
 
 
 0.990
Ga0061063_2171
Unannotated protein; Belongs to the aconitase/IPM isomerase family.
 
  
 0.960
Ga0061063_2172
Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.868
prpB
Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.785
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
 
 
   0.741
Ga0061063_2618
Unannotated protein; Belongs to the citrate synthase family.
 
  
 0.733
glpK
Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.724
Ga0061063_1356
Unannotated protein.
     
 0.719
Ga0061063_1882
Unannotated protein.
     
 0.719
Ga0061063_2624
Unannotated protein; Belongs to the peptidase S1C family.
    
  0.688
Your Current Organism:
Gulbenkiania indica
NCBI taxonomy Id: 375574
Other names: Chromobacterium sp. HT27, DSM 17901, G. indica, Gulbenkiania indica Jyoti et al. 2010, JCM 15969, strain HT27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.