STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR40224.1Glycosyl transferases group 1. (360 aa)    
Predicted Functional Partners:
SFR40214.1
Fibronectin type III domain-containing protein.
 
  
 0.858
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.825
SFR58580.1
Hypothetical protein.
  
     0.756
SFR48033.1
Hypothetical protein.
  
     0.752
SFR44072.1
Protein of unknown function.
  
     0.741
SFR38514.1
CBS domain-containing protein.
  
    0.739
SFR54745.1
LysM domain-containing protein.
  
     0.732
SFR41665.1
Hook-length control protein FliK.
  
     0.711
SFR42111.1
TPR repeat.
  
  
  0.702
SFR49130.1
Protein of unknown function.
  
     0.693
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.