STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR41882.1Protein of unknown function. (453 aa)    
Predicted Functional Partners:
SFR42417.1
Protein of unknown function.
 
    0.902
SFR49518.1
Protein of unknown function.
 
    0.902
SFR39127.1
Protein of unknown function.
  
 
 
 0.880
SFR58060.1
Uncharacterized protein.
 
  
 0.867
SFR58067.1
Hypothetical protein.
 
   
 0.792
SFR41878.1
Hypothetical protein.
       0.734
SFR42828.1
N-acetylmuramoyl-L-alanine amidase.
    
   0.607
SFR40658.1
Lipoprotein-releasing system permease protein.
   
 
 0.595
SFR40923.1
Putative ABC transport system permease protein.
   
 
 0.595
SFR46308.1
Putative ABC transport system permease protein.
   
 
 0.595
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.