Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR41390.1 | SFR43436.1 | SAMN04488073_0777 | SAMN04488073_1163 | 6-pyruvoyl tetrahydropterin synthase. | Protein of unknown function. | 0.403 |
SFR43427.1 | SFR43428.1 | SAMN04488073_1161 | SAMN04488073_1162 | DNA-binding transcriptional regulator, Lrp family. | Arginine N-succinyltransferase. | 0.539 |
SFR43427.1 | SFR43436.1 | SAMN04488073_1161 | SAMN04488073_1163 | DNA-binding transcriptional regulator, Lrp family. | Protein of unknown function. | 0.565 |
SFR43428.1 | SFR43427.1 | SAMN04488073_1162 | SAMN04488073_1161 | Arginine N-succinyltransferase. | DNA-binding transcriptional regulator, Lrp family. | 0.539 |
SFR43428.1 | SFR43436.1 | SAMN04488073_1162 | SAMN04488073_1163 | Arginine N-succinyltransferase. | Protein of unknown function. | 0.872 |
SFR43428.1 | astE | SAMN04488073_1162 | SAMN04488073_1510 | Arginine N-succinyltransferase. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.924 |
SFR43436.1 | SFR41390.1 | SAMN04488073_1163 | SAMN04488073_0777 | Protein of unknown function. | 6-pyruvoyl tetrahydropterin synthase. | 0.403 |
SFR43436.1 | SFR43427.1 | SAMN04488073_1163 | SAMN04488073_1161 | Protein of unknown function. | DNA-binding transcriptional regulator, Lrp family. | 0.565 |
SFR43436.1 | SFR43428.1 | SAMN04488073_1163 | SAMN04488073_1162 | Protein of unknown function. | Arginine N-succinyltransferase. | 0.872 |
SFR43436.1 | SFR58206.1 | SAMN04488073_1163 | SAMN04488073_3103 | Protein of unknown function. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.564 |
SFR43436.1 | astE | SAMN04488073_1163 | SAMN04488073_1510 | Protein of unknown function. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.489 |
SFR58206.1 | SFR43436.1 | SAMN04488073_3103 | SAMN04488073_1163 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Protein of unknown function. | 0.564 |
astE | SFR43428.1 | SAMN04488073_1510 | SAMN04488073_1162 | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | Arginine N-succinyltransferase. | 0.924 |
astE | SFR43436.1 | SAMN04488073_1510 | SAMN04488073_1163 | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | Protein of unknown function. | 0.489 |