Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR38874.1 | SFR43980.1 | SAMN04488073_0271 | SAMN04488073_1263 | Glutathione reductase (NADPH). | Uncharacterized conserved protein, MAPEG superfamily. | 0.490 |
SFR38874.1 | SFR46826.1 | SAMN04488073_0271 | SAMN04488073_1715 | Glutathione reductase (NADPH). | Glutathione S-transferase. | 0.788 |
SFR43980.1 | SFR38874.1 | SAMN04488073_1263 | SAMN04488073_0271 | Uncharacterized conserved protein, MAPEG superfamily. | Glutathione reductase (NADPH). | 0.490 |
SFR43980.1 | SFR43985.1 | SAMN04488073_1263 | SAMN04488073_1264 | Uncharacterized conserved protein, MAPEG superfamily. | Hypothetical protein. | 0.664 |
SFR43980.1 | SFR46826.1 | SAMN04488073_1263 | SAMN04488073_1715 | Uncharacterized conserved protein, MAPEG superfamily. | Glutathione S-transferase. | 0.431 |
SFR43980.1 | mtgA | SAMN04488073_1263 | SAMN04488073_1262 | Uncharacterized conserved protein, MAPEG superfamily. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.535 |
SFR43985.1 | SFR43980.1 | SAMN04488073_1264 | SAMN04488073_1263 | Hypothetical protein. | Uncharacterized conserved protein, MAPEG superfamily. | 0.664 |
SFR43985.1 | mtgA | SAMN04488073_1264 | SAMN04488073_1262 | Hypothetical protein. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.467 |
SFR46826.1 | SFR38874.1 | SAMN04488073_1715 | SAMN04488073_0271 | Glutathione S-transferase. | Glutathione reductase (NADPH). | 0.788 |
SFR46826.1 | SFR43980.1 | SAMN04488073_1715 | SAMN04488073_1263 | Glutathione S-transferase. | Uncharacterized conserved protein, MAPEG superfamily. | 0.431 |
mtgA | SFR43980.1 | SAMN04488073_1262 | SAMN04488073_1263 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Uncharacterized conserved protein, MAPEG superfamily. | 0.535 |
mtgA | SFR43985.1 | SAMN04488073_1262 | SAMN04488073_1264 | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | Hypothetical protein. | 0.467 |