STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44285.1Nucleotidyltransferase domain-containing protein. (210 aa)    
Predicted Functional Partners:
SFR44278.1
Hypothetical protein.
 
     0.950
SFR47435.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.763
SFR44273.1
Superfamily I DNA and/or RNA helicase.
       0.618
SFR44291.1
MOSC domain-containing protein YiiM.
       0.495
SFR49267.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
  
    0.492
SFR44295.1
Iron complex transport system substrate-binding protein.
       0.413
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.