STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44309.1Tricorn protease C1 domain-containing protein. (448 aa)    
Predicted Functional Partners:
SFR38950.1
Putative peptidoglycan binding domain-containing protein.
   
  0.644
SFR42958.1
Serine protease.
   
  0.644
SFR43139.1
Thrombospondin type 3 repeat-containing protein.
   
  0.644
SFR49362.1
Protein of unknown function.
   
  0.644
SFR60170.1
MSHA biogenesis protein MshQ.
   
  0.644
SFR61548.1
Protein of unknown function.
   
  0.644
SFR47435.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
  0.643
SFR38315.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.585
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.481
SFR44316.1
Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family.
       0.458
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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