Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR38315.1 | SFR44309.1 | SAMN04488073_0165 | SAMN04488073_1317 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Tricorn protease C1 domain-containing protein. | 0.585 |
SFR38315.1 | SFR47435.1 | SAMN04488073_0165 | SAMN04488073_1820 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.996 |
SFR38315.1 | pheT | SAMN04488073_0165 | SAMN04488073_3087 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.554 |
SFR38950.1 | SFR44309.1 | SAMN04488073_0286 | SAMN04488073_1317 | Putative peptidoglycan binding domain-containing protein. | Tricorn protease C1 domain-containing protein. | 0.644 |
SFR42958.1 | SFR44309.1 | SAMN04488073_1075 | SAMN04488073_1317 | Serine protease. | Tricorn protease C1 domain-containing protein. | 0.644 |
SFR43139.1 | SFR44309.1 | SAMN04488073_1108 | SAMN04488073_1317 | Thrombospondin type 3 repeat-containing protein. | Tricorn protease C1 domain-containing protein. | 0.644 |
SFR44309.1 | SFR38315.1 | SAMN04488073_1317 | SAMN04488073_0165 | Tricorn protease C1 domain-containing protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.585 |
SFR44309.1 | SFR38950.1 | SAMN04488073_1317 | SAMN04488073_0286 | Tricorn protease C1 domain-containing protein. | Putative peptidoglycan binding domain-containing protein. | 0.644 |
SFR44309.1 | SFR42958.1 | SAMN04488073_1317 | SAMN04488073_1075 | Tricorn protease C1 domain-containing protein. | Serine protease. | 0.644 |
SFR44309.1 | SFR43139.1 | SAMN04488073_1317 | SAMN04488073_1108 | Tricorn protease C1 domain-containing protein. | Thrombospondin type 3 repeat-containing protein. | 0.644 |
SFR44309.1 | SFR44316.1 | SAMN04488073_1317 | SAMN04488073_1318 | Tricorn protease C1 domain-containing protein. | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | 0.458 |
SFR44309.1 | SFR47435.1 | SAMN04488073_1317 | SAMN04488073_1820 | Tricorn protease C1 domain-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.643 |
SFR44309.1 | SFR49362.1 | SAMN04488073_1317 | SAMN04488073_2276 | Tricorn protease C1 domain-containing protein. | Protein of unknown function. | 0.644 |
SFR44309.1 | SFR60170.1 | SAMN04488073_1317 | SAMN04488073_3272 | Tricorn protease C1 domain-containing protein. | MSHA biogenesis protein MshQ. | 0.644 |
SFR44309.1 | SFR61548.1 | SAMN04488073_1317 | SAMN04488073_3435 | Tricorn protease C1 domain-containing protein. | Protein of unknown function. | 0.644 |
SFR44309.1 | pheT | SAMN04488073_1317 | SAMN04488073_3087 | Tricorn protease C1 domain-containing protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.481 |
SFR44316.1 | SFR44309.1 | SAMN04488073_1318 | SAMN04488073_1317 | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | Tricorn protease C1 domain-containing protein. | 0.458 |
SFR47435.1 | SFR38315.1 | SAMN04488073_1820 | SAMN04488073_0165 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.996 |
SFR47435.1 | SFR44309.1 | SAMN04488073_1820 | SAMN04488073_1317 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Tricorn protease C1 domain-containing protein. | 0.643 |
SFR49362.1 | SFR44309.1 | SAMN04488073_2276 | SAMN04488073_1317 | Protein of unknown function. | Tricorn protease C1 domain-containing protein. | 0.644 |
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