STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44583.1Amino acid ABC transporter ATP-binding protein, PAAT family. (248 aa)    
Predicted Functional Partners:
SFR44575.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SFR44571.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 
 0.993
SFR41170.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.982
SFR37814.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.965
SFR37820.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.961
SFR45522.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.915
SFR41175.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
 0.910
SFR41179.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.869
SFR37809.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.867
SFR45536.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 
 0.855
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
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