STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR48074.1DNA-binding transcriptional regulator, MerR family. (151 aa)    
Predicted Functional Partners:
SFR48079.1
Cu+-exporting ATPase.
 
  
 0.920
SFR60625.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.784
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.760
SFR40876.1
DNA-J related protein.
  
 
 0.678
SFR43991.1
DnaJ domain-containing protein.
  
 
 0.678
SFR44512.1
Curved DNA-binding protein.
  
 
 0.678
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
  
 
 0.678
SFR61226.1
Na+/proline symporter.
   
 0.665
SFR46027.1
PAS domain S-box-containing protein.
   
 0.657
SFR48817.1
PAS domain S-box-containing protein.
   
 0.657
Your Current Organism:
Marinobacter gudaonensis
NCBI taxonomy Id: 375760
Other names: CGMCC 1.6294, DSM 18066, LMG 23509, LMG:23509, M. gudaonensis, Marinobacter gudaonensis Gu et al. 2007, Marinobacter sp. 61A, Marinobacter sp. 61B, strain SL014B61A
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.