STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vegfcVascular endothelial growth factor C. (425 aa)    
Predicted Functional Partners:
ENSSORP00005019730
annotation not available
    
 0.977
flt4
Fms related tyrosine kinase 4.
    
 0.958
LOC115427219
Vascular endothelial growth factor receptor kdr-like.
    
 0.958
kdr
Kinase insert domain receptor.
    
 0.958
pdgfrb
Platelet derived growth factor receptor beta.
    
 0.946
ENSSORP00005017841
Fms-related tyrosine kinase 3.
    
 0.932
pdgfra
Platelet derived growth factor receptor alpha.
    
 0.932
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.923
vegfb
Vascular endothelial growth factor B.
     
0.921
vegfd
Vascular endothelial growth factor D.
     
0.911
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.