STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf414Zinc finger protein 414. (340 aa)    
Predicted Functional Partners:
ENSSORP00005021452
annotation not available
    
  0.654
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.583
ENSSORP00005036459
annotation not available
    
  0.576
ENSSORP00005029795
annotation not available
    
  0.574
ENSSORP00005029797
annotation not available
    
  0.574
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
  0.563
YTHDC2
YTH domain containing 2.
    
  0.530
gtf3c5
General transcription factor IIIC subunit 5.
    
 0.516
mrps15
Mitochondrial ribosomal protein S15.
   
  0.503
mrps16
Mitochondrial ribosomal protein S16.
   
  0.502
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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