STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005000293annotation not available (332 aa)    
Predicted Functional Partners:
sorl1
Sortilin related receptor 1.
    
 0.715
naif1
Nuclear apoptosis inducing factor 1.
    
 
 0.695
ENSSORP00005026265
annotation not available
   
 0.663
ENSSORP00005027047
annotation not available
   
 0.663
ENSSORP00005005657
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
  0.589
glod4
Glyoxalase domain containing 4.
    
  0.585
LOC115419763
Nerve growth factor-like.
     
 0.560
bdnf
Brain derived neurotrophic factor.
     
 0.547
kitlg
KIT ligand.
   
 
  0.539
ereg
Epiregulin.
     
  0.538
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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