STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424712Nuclear body protein SP140-like protein. (622 aa)    
Predicted Functional Partners:
ENSSORP00005019501
annotation not available
   
 
 0.891
LOC115424292
SUMO-conjugating enzyme UBC9-like.
    
 0.691
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.691
SUMO3
Small ubiquitin-related modifier 3.
    
 0.659
sumo2
Small ubiquitin like modifier 2.
    
 0.659
LOC115412485
Small ubiquitin-related modifier 3-like.
    
 0.659
ENSSORP00005058413
annotation not available
    
 0.615
LOC115412982
E3 SUMO-protein ligase RanBP2-like.
    
 0.574
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.559
LOC115430514
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.523
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.