STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115423791Protein TsetseEP-like. (336 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.898
LOC115413913
E3 ubiquitin-protein ligase MSL2-like.
    
 0.792
MSL2
E3 ubiquitin-protein ligase MSL2-like.
    
 0.792
maml1
Mastermind like transcriptional coactivator 1.
   
 0.782
nxf1
Nuclear RNA export factor 1.
    
 0.768
LOC115427830
Protein S100-A1-like.
    
 0.765
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.717
psenen
Presenilin enhancer, gamma-secretase subunit.
    
 0.715
LOC115412409
Gamma-secretase subunit Aph-1b.
    
 0.704
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.697
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: medium (48%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.