Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005000545annotation not available (385 aa)    
Predicted Functional Partners:
ENSSORP00005021029
annotation not available
    
 0.814
ENSSORP00005021034
annotation not available
    
 0.814
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.701
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.646
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.641
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.578
rpa1
Replication protein A1.
    
 0.547
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.547
LOC115437522
Interleukin-20 receptor subunit beta-like.
    
  0.531
ENSSORP00005002746
V-myb avian myeloblastosis viral oncogene homolog-like 1.
    
 0.525
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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