STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adslAdenylosuccinate lyase. (491 aa)    
Predicted Functional Partners:
LOC115418104
Uncharacterized LOC115418104.
  
 0.999
gart
annotation not available
  
 0.999
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 0.998
ppat
Phosphoribosyl pyrophosphate amidotransferase.
  
 
 0.994
LOC115433212
Adenylosuccinate synthetase isozyme 2-like.
  
 0.989
adss2
Adenylosuccinate synthase 2.
  
 0.989
adss1
Adenylosuccinate synthase 1.
  
 0.989
ENSSORP00005002188
Zgc:174895.
  
 0.987
aprt
Adenine phosphoribosyltransferase.
  
 0.987
ADK
Adenosine kinase-like.
  
 0.977
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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