STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005001067annotation not available (792 aa)    
Predicted Functional Partners:
LOC115438898
DNA-directed RNA polymerase II subunit RPB1-like.
    
 0.972
sclt1
Sodium channel and clathrin linker 1.
    
 0.970
cep83
Centrosomal protein 83.
    
 0.965
ENSSORP00005014412
annotation not available
   
 
 0.964
polr2b
RNA polymerase II subunit B.
   
 0.962
ENSSORP00005022373
Centrosomal protein 89.
     
 0.962
ENSSORP00005036923
annotation not available
     
 0.943
xrn2
5'-3' exoribonuclease 2.
   
 
 0.931
DXO
Decapping exoribonuclease.
    
 
 0.931
polr1b
RNA polymerase I subunit B.
   
 0.894
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.