STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424059Cyclic AMP-dependent transcription factor ATF-4-like. (452 aa)    
Predicted Functional Partners:
cebpb
CCAAT enhancer binding protein beta.
   
 0.963
cebpg
CCAAT enhancer binding protein gamma.
   
 0.958
ddit3
DNA damage inducible transcript 3.
   
 0.944
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
     
 0.916
eif2ak3
Eukaryotic translation initiation factor 2 alpha kinase 3.
     
 0.916
LOC115421369
Protein phosphatase 1 regulatory subunit 15A-like.
     
 0.871
atf3
Activating transcription factor 3.
    
 0.868
ENSSORP00005001714
annotation not available
    
 0.856
ENSSORP00005014231
cAMP responsive element binding protein 5b.
    
 0.856
ENSSORP00005048317
annotation not available
    
 0.854
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.