STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sod3Superoxide dismutase 3. (217 aa)    
Predicted Functional Partners:
ENSSORP00005046235
Copper chaperone for superoxide dismutase.
 
0.993
sod2
Superoxide dismutase 2.
  
 0.991
park7
Parkinsonism associated deglycase.
  
 0.978
cat
Catalase.
  
 0.953
LOC115429578
Heme-binding protein 1-like.
    
 
 0.921
hspa5
Heat shock protein family A (Hsp70) member 5.
   
 0.912
ENSSORP00005023255
Voltage-dependent anion channel 1.
   
 
 0.895
ENSSORP00005032706
Ankyrin repeat domain 45.
   
 0.885
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 0.874
LOC115438545
Thioredoxin-like.
   
 0.871
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.