STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhhDesert hedgehog signaling molecule. (452 aa)    
Predicted Functional Partners:
ENSSORP00005038104
Patched 2.
   
 0.986
ptch1
Patched 1.
   
 0.984
boc
BOC cell adhesion associated, oncogene regulated.
    
 0.977
cdon
Cell adhesion associated, oncogene regulated.
    
 0.977
ENSSORP00005047117
Dispatched homolog 2 (Drosophila).
   
 0.974
ENSSORP00005010402
Hedgehog interacting protein.
    
 0.968
ENSSORP00005033641
Dispatched RND transporter family member 3.
    
 0.953
vps52
VPS52 subunit of GARP complex.
    
 0.949
vps54
VPS54 subunit of GARP complex.
    
 0.933
vps53
VPS53 subunit of GARP complex.
    
 0.923
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.