STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005001333Solute carrier family 6 member 5. (768 aa)    
Predicted Functional Partners:
ENSSORP00005031522
Solute carrier family 1 member 1.
    
 0.700
LOC115418622
Excitatory amino acid transporter 1-like.
  
 
 0.574
SLC1A3
Solute carrier family 1 member 3.
  
 
 0.574
LOC115426276
Excitatory amino acid transporter 1-like.
  
 
 0.574
ENSSORP00005010389
Solute carrier family 1 member 9.
  
 
 0.571
slc6a2
Solute carrier family 6 member 2.
  
  
 
0.561
ENSSORP00005057150
Solute carrier family 6 member 3.
  
  
 
0.558
ENSSORP00005020951
annotation not available
    
 0.529
ENSSORP00005052444
Solute carrier family 1 member 8b.
    
 0.529
slc1a2
Solute carrier family 1 member 2.
  
 
 0.528
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.