STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emp2Epithelial membrane protein 2. (165 aa)    
Predicted Functional Partners:
ENSSORP00005048505
Intersectin 2b.
      
 0.610
ITSN2
Intersectin 2.
      
 0.610
ENSSORP00005047471
Intersectin 1 (SH3 domain protein).
      
 0.516
dnajc8
DnaJ heat shock protein family (Hsp40) member C8.
      
 0.465
garem1
GRB2 associated regulator of MAPK1 subtype 1.
      
 0.451
ENSSORP00005015560
annotation not available
      
 0.440
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.