STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115430520NACHT, LRR and PYD domains-containing protein 12-like. (1227 aa)    
Predicted Functional Partners:
ENSSORP00005021452
annotation not available
  
 
  0.797
LOC115437585
Adhesion G protein-coupled receptor L2-like.
    
  0.782
ENSSORP00005018197
Adhesion G protein-coupled receptor L1a.
    
  0.782
ENSSORP00005029701
Adhesion G protein-coupled receptor L3.1.
    
  0.782
ENSSORP00005038084
annotation not available
    
  0.782
ENSSORP00005052226
Adhesion G protein-coupled receptor L2a.
    
  0.782
ENSSORP00005058077
annotation not available
    
  0.782
LOC115436394
Apoptosis-associated speck-like protein containing a CARD.
    
 0.755
LOC115436393
Apoptosis-associated speck-like protein containing a CARD.
    
 0.755
nek7
NIMA related kinase 7.
    
 0.730
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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