STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115431276Calpain small subunit 1-like. (216 aa)    
Predicted Functional Partners:
ENSSORP00005001617
annotation not available
   
 0.884
ENSSORP00005001626
annotation not available
   
 0.884
ENSSORP00005001647
annotation not available
   
 0.884
capn7
Calpain 7.
   
 0.866
ENSSORP00005024426
Calpain 3a, (p94).
 
 
 0.813
CAPN6
Calpain-5-like.
 
 
 0.806
capn5
Calpain 5.
 
 
 0.804
ENSSORP00005008106
Calpain 5b.
 
 
 0.799
CAPN15
Calpain 15.
   
 0.795
ENSSORP00005045444
Calpain 15.
   
 0.795
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.