STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acy1Aminoacylase 1. (460 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase 1.
  
 0.950
otc
Ornithine carbamoyltransferase.
    
 0.909
ENSSORP00005044357
N-acetylglutamate synthase.
  
 
 0.894
oat
Ornithine aminotransferase.
  
 
 0.884
ENSSORP00005045617
Agmatine ureohydrolase (agmatinase).
  
 
 0.883
arg2
Arginase 2.
  
 
 0.879
ENSSORP00005053115
Arginase 1.
  
 
 0.873
ENSSORP00005053154
annotation not available
  
 
 0.873
LOC115427024
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like.
   
 0.867
ENSSORP00005046314
Glutamine--fructose-6-phosphate transaminase 1.
   
 0.867
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.