STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115428757Lactose-binding lectin l-2-like. (186 aa)    
Predicted Functional Partners:
LOC115435485
C-type lectin domain family 7 member A-like.
    
 0.599
LOC115437027
Collectin-12-like.
    
 
0.541
tyrobp
TYRO protein tyrosine kinase binding protein.
    
 0.541
ENSSORP00005007525
annotation not available
    
  0.501
LOC115425813
Tenascin-like.
   
  0.501
ENSSORP00005014433
annotation not available
    
  0.501
LOC115436016
Tenascin-like.
    
  0.501
ENSSORP00005035294
Zmp:0000000846.
   
  0.501
ENSSORP00005039108
Tenascin N.
    
  0.501
ENSSORP00005039113
Tenascin R (restrictin, janusin).
   
  0.501
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.