STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgb8Integrin subunit beta 8. (796 aa)    
Predicted Functional Partners:
itga8
Integrin subunit alpha 8.
    
 0.981
LOC115432149
Transforming growth factor beta-1 proprotein-like.
   
 0.974
itga4
Integrin subunit alpha 4.
    
 0.971
itga9
Integrin subunit alpha 9.
    
 0.969
ITGA7
Integrin subunit alpha 7.
    
 0.958
ENSSORP00005002903
Integrin, alpha V.
    
 0.953
ENSSORP00005015103
annotation not available
    
 0.953
ENSSORP00005055230
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide).
    
 0.953
ENSSORP00005003075
Integrin, alpha 10.
    
 0.952
ENSSORP00005021842
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2.
    
 0.952
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.