STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFARBifunctional apoptosis regulator. (311 aa)    
Predicted Functional Partners:
ENSSORP00005036459
annotation not available
    
 0.739
trip12
Thyroid hormone receptor interactor 12.
    
 0.707
ENSSORP00005053836
annotation not available
    
 0.707
ENSSORP00005022929
S-phase kinase-associated protein 1.
    
 0.699
rps27a
Ribosomal protein S27a.
   
  0.687
LOC115438809
Ubiquilin-4-like.
   
  0.687
LOC115437146
ubiquitin-60S ribosomal protein L40-like.
    
 0.683
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.683
ENSSORP00005012418
Nibrin.
    
 0.659
LOC115438960
NEDD8.
    
 0.652
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.