STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005002739Si:ch211-246m6.5. (1253 aa)    
Predicted Functional Partners:
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.717
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.697
psenen
Presenilin enhancer, gamma-secretase subunit.
    
 0.657
LOC115412409
Gamma-secretase subunit Aph-1b.
    
  0.655
ENSSORP00005021452
annotation not available
   
  0.646
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.635
ENSSORP00005030043
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.635
NCSTN
Nicastrin-like.
    
 0.620
ENSSORP00005026261
annotation not available
    
 0.620
ENSSORP00005025709
NUMB endocytic adaptor protein.
    
 0.610
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.