STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA7Integrin subunit alpha 7. (1016 aa)    
Predicted Functional Partners:
LOC115430656
Integrin beta-2-like.
   
 0.968
LOC115416288
Integrin beta-1-like.
   
 0.968
ENSSORP00005046664
Integrin, beta 1a.
   
 0.968
ENSSORP00005056848
Integrin, beta 4.
   
 0.968
itgb8
Integrin subunit beta 8.
    
 0.958
itgb5
Integrin subunit beta 5.
   
 0.955
itgb6
Integrin subunit beta 6.
   
 0.954
itga8
Integrin subunit alpha 8.
     
0.926
ENSSORP00005003075
Integrin, alpha 10.
   
 
0.926
itga9
Integrin subunit alpha 9.
     
0.926
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.