STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005003114Solute carrier family 26 member 10. (691 aa)    
Predicted Functional Partners:
LOC115429578
Heme-binding protein 1-like.
   
 0.882
mre11
MRE11 homolog, double strand break repair nuclease.
  
  0.873
lyrm4
LYR motif-containing protein 4B-like.
    
 0.794
ENSSORP00005034982
Si:ch211-152c8.4.
    
 0.794
ENSSORP00005017029
Relaxin family peptide receptor 1.
   
 
 0.748
ENSSORP00005038431
Relaxin family peptide receptor 2a.
   
 
 0.748
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
     
 0.741
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
     
 0.741
ENSSORP00005003266
annotation not available
     
 0.679
ENSSORP00005005674
Solute carrier family 4 member 1a (Diego blood group).
     
 0.679
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.