STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005003368annotation not available (753 aa)    
Predicted Functional Partners:
rabgef1
RAB guanine nucleotide exchange factor 1.
   
 0.974
LOC115425892
Rab5 GDP/GTP exchange factor-like.
   
 0.974
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.911
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.911
rbsn
Rabenosyn, RAB effector.
   
 0.894
ENSSORP00005009947
Alsin Rho guanine nucleotide exchange factor ALS2 b.
    
 0.859
ENSSORP00005033104
annotation not available
    
 0.859
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.847
ankfy1
Ankyrin repeat and FYVE domain containing 1.
   
 0.803
gak
Cyclin G associated kinase.
   
 0.792
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.