STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115423735Fascin-2-like. (491 aa)    
Predicted Functional Partners:
ENSSORP00005022284
Glutaredoxin and cysteine rich domain containing 1 a.
     
 0.638
ENSSORP00005031725
Taperin.
     
 0.635
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.625
ENSSORP00005003750
Espin like a.
    
 0.559
ENSSORP00005007471
Espin.
    
 0.559
twf1
Twinfilin actin binding protein 1.
     
 0.549
ENSSORP00005050089
Twinfilin actin-binding protein 2b.
     
 0.549
myo3b
Myosin IIIB.
    
 0.494
ENSSORP00005020097
Xin actin binding repeat containing 2a.
    
 0.492
LOC115438011
Xin actin-binding repeat-containing protein 1-like.
    
 0.492
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.