STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tescTescalcin. (220 aa)    
Predicted Functional Partners:
ppp3ca
Protein phosphatase 3 catalytic subunit alpha.
   
 0.843
ENSSORP00005020295
Protein phosphatase 3, catalytic subunit, alpha isozyme.
   
 0.843
LOC115430726
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like.
   
 0.843
ENSSORP00005048611
Protein phosphatase 3, catalytic subunit, beta isozyme.
   
 0.843
LOC115425712
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like.
   
 0.843
LOC115430583
Peripheral plasma membrane protein CASK-like.
    
 0.838
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.838
ppp4c
Protein phosphatase 4 catalytic subunit.
    
 0.777
LOC115421889
Peptidyl-prolyl cis-trans isomerase FKBP1A-like.
   
 0.712
fkbp3
FKBP prolyl isomerase 3.
   
 0.712
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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