STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005004192Coagulation factor X. (490 aa)    
Predicted Functional Partners:
ENSSORP00005035588
annotation not available
  
 0.871
LOC115427460
Coagulation factor VIII-like.
   
 0.793
ENSSORP00005000739
annotation not available
    
 0.792
LOC115437896
Tissue factor-like.
    
 0.792
LOC115413084
Tissue factor pathway inhibitor-like.
    
 0.781
mst1r
Macrophage stimulating 1 receptor.
    
  0.756
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.756
ENSSORP00005009329
Macrophage stimulating 1 receptor a.
    
  0.756
ENSSORP00005009333
annotation not available
    
  0.756
ENSSORP00005048810
Si:ch1073-416d2.3.
  
 0.735
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.