STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005004677annotation not available (939 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.765
ift81
Intraflagellar transport 81.
    
 0.602
ENSSORP00005024951
TNF receptor-associated factor 7.
    
 0.594
mars1
methionyl-tRNA synthetase 1.
   
 0.589
rps3
Ribosomal protein S3.
    
 0.576
ifi35
Interferon induced protein 35.
   
 
 0.568
ENSSORP00005039710
Intraflagellar transport 88 homolog.
   
 0.556
ENSSORP00005046001
WD repeat domain 90.
    
 0.555
ENSSORP00005009122
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.551
ENSSORP00005022929
S-phase kinase-associated protein 1.
   
 0.551
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.