STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424582Tetratricopeptide repeat protein 30A-like. (653 aa)    
Predicted Functional Partners:
ENSSORP00005009122
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.989
ENSSORP00005039710
Intraflagellar transport 88 homolog.
    
 0.989
ift80
Intraflagellar transport 80.
  
 
 0.988
ttc26
Tetratricopeptide repeat domain 26.
    
 0.988
ift81
Intraflagellar transport 81.
    
 0.987
cluap1
Clusterin associated protein 1.
   
 0.986
ift172
Intraflagellar transport 172.
   
 0.986
traf3ip1
TRAF3 interacting protein 1.
    
 0.985
ift57
Intraflagellar transport 57.
   
 0.985
LOC115416394
Intraflagellar transport protein 46 homolog.
    
 0.982
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.