STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005004993annotation not available (348 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.681
grb2
Growth factor receptor bound protein 2.
   
 0.670
ENSSORP00005000011
annotation not available
   
 0.651
grap2
GRB2 related adaptor protein 2.
   
 0.651
nck2
NCK adaptor protein 2.
    
 0.619
ENSSORP00005054608
NCK adaptor protein 1b.
    
 0.619
eci2
enoyl-CoA delta isomerase 2.
    
  0.618
ENSSORP00005010436
Vav 3 guanine nucleotide exchange factor b.
   
 0.597
VAV1
Vav guanine nucleotide exchange factor 1.
   
 0.597
ENSSORP00005049319
Vav 2 guanine nucleotide exchange factor.
   
 0.597
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.