STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005005192annotation not available (244 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.495
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.476
rad50
RAD50 double strand break repair protein.
    
  0.472
ENSSORP00005023475
annotation not available
  
 0.467
LOC115426502
Interleukin-1 beta-like.
   
 0.464
ENSSORP00005020702
annotation not available
   
 0.456
ENSSORP00005054984
CD79a molecule, immunoglobulin-associated alpha.
   
 0.455
dhh
Desert hedgehog signaling molecule.
    
  0.453
shh
Sonic hedgehog signaling molecule.
    
  0.453
LOC115411846
Indian hedgehog B protein-like.
    
  0.453
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.