STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115430810Uncharacterized LOC115430810. (214 aa)    
Predicted Functional Partners:
ENSSORP00005018494
poly(A) specific ribonuclease subunit PAN3.
    
 0.901
ncbp2
Nuclear cap binding protein subunit 2.
   
 0.870
LOC115438450
Eukaryotic initiation factor 4A-I.
   
 0.861
eif4a2
Eukaryotic translation initiation factor 4A2.
   
 0.861
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.856
rps3a
Ribosomal protein S3A.
   
 0.822
eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.816
LOC115413536
Eukaryotic translation initiation factor 4E-1A.
    
 0.806
LOC115423181
Eukaryotic translation initiation factor 4E type 3-like.
    
 0.806
LOC115426874
Eukaryotic translation initiation factor 4E-1A-like.
    
 0.806
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.