STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005005529Si:dkey-91i10.2. (562 aa)    
Predicted Functional Partners:
ENSSORP00005048505
Intersectin 2b.
    
 
0.679
ITSN2
Intersectin 2.
    
 
0.679
gas7
Growth arrest specific 7.
   
 0.674
LOC115410819
Growth arrest-specific protein 7-like.
   
 0.674
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
 0.669
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
   
  0.663
kremen1
Kringle containing transmembrane protein 1.
    
 0.639
LOC115423186
somatostatin-1B-like.
    
 0.639
ENSSORP00005025310
WSC domain containing 1b.
    
 0.639
wscd2
WSC domain containing 2.
    
 0.639
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.